Urine clues for prostate cancer

SarcosineA biomarker for prostate cancer has been identified in urine. Details of the molecule sarcosine is published later this week in the journal Nature.

Arul Chinnaiyan and colleagues profiled the metabolites present in the urine of prostate cancer patients compared and compared it to those of healthy individuals. They found that sarcosine – a derivative of the amino acid glycine – was present at higher levels in the urine of patients with aggressive prostate cancer. The team went on to show that simply adding sarcosine to cultures of benign prostate cells was enough to turn them into invasive cancer cells capable of spread, indicating that the molecule may have an important role in disease.

This is the first time a biomarker for prostate cancer has been detected in urine. Follow up research is now needed to develop a non-invasive approach to testing. The researchers hope that their findings could one day be used to aid prostate cancer diagnosis and may offer new opportunities for therapeutic intervention.

10.1038/nature07762

Leukemia Tweezers

stained-leukemia-cellsThe first 2009 issue of SpectroscopyNOW is now available:

Tweezing out leukemia spectra – US researchers have used laser tweezers Raman spectroscopy (LTRS) to help them characterize the effects of different chemical fixation procedures on the spectra of healthy cells and leukemia cells and to avoid the misinterpretation of data.

Crime and punishment – A truly interdisciplinary collaboration between biology, law and neuroscience at Vanderbilt University has used functional magnetic resonance imaging, fMRI, to watch how the brain changes when a person thinks about crime and punishment.

Folding issues – NMR spectroscopy is helping US chemists work out shorter and simpler routes to protein-based drugs for treating a wide range of illnesses including diabetes, cancer, and hepatitis.

By Jove, it’s hot and steamy – In 2007, astronomers discovered that a scorching-hot gas planet beyond 63 light years from our solar system is steaming with water vapour, now, it seems the planet, a hot Jupiters, also suffers from high carbon dioxide levels in its atmosphere.

Opal reversal – Electrochemically oxidizing and reducing an inverse polymer-gel opal causes it to swell and shrink, which alters the wavelength of the light it diffracts brightly, from ultraviolet through the visible to the near infrared, the material could pave the way to new display and monitor technologies.

X-rayed dinobird – Researchers at the SLAC National Accelerator Laboratory used the Stanford Synchrotron Radiation Lightsource (SSRL) to shine intense X-ray beams on the so-called “dinobird” to reveal chemical secrets that have been hidden from view for millions of years.

Chillis and Cancer

Capsaicin structureIf you’ve ever worried that a steaming hot bowl of chili or cajun chicken might be doing you more harm than good, then you’re not alone. Research earlier this decades pointed out that capsaicin (the “hot” compound in red hot chili peppers) and safrole (the hot molecule in black pepper) could both be carcinogenic.

Thankfully, for lovers of Mexican-American, Cajun, white Creole, black Creole, spicy Indian food, Malaysian, Thai etc etc…the opposite seems to be true. It is more likely that compounds found in spicy foods are good for us. One might wonder how such cuisine could have persisted for countless generations if they weren’t good for us. After all the news just in on saturated animal fat is that even it is better for us than the last 20 years of health scaremongering would have you believe and we have been eating that for countless, countless generations.

Anyway, the BayBlab submission to the Cancer Research Blog Carnival #14 hosted on Sciencebase today, cites the various compounds in spices that are thought to have health-giving properties. These include turmeric (curcumin), red chili (capsaicin), cloves (eugenol), ginger (zerumbone), fennel (anethole), kokum (gambogic acid), fenugreek (diosgenin), and black cumin (thymoquinone). The ability of all these compounds to prevent, rather than cause, cancer has apparently now been established.

So, with your health taken care of, it’s time to turn up the heat and tuck into that chili bowl with a smug, if scorched, look on your face!

Cancer Research Blog Carnival #14

cancer research blog carnivalI don’t know anyone who hasn’t got a cancer story to tell, whether it is personal experience, a relative or friend, or association with their patients or through their research.

Cancer has always been with us, but contrary to the popular image propagated by the mainstream media it is not a simple, nor single disease. In this month’s cancer research blog carnival hosted on the Sciencebase Science Blog, I present a few selected posts from fellow bloggers discussing various aspects of cancer research. Thanks to everyone who submitted a cancer research post.

First up is PalMD on the Denialism blog who explains that cancer is the second leading cause of death, in the US at least, and confirms the ubiquity of the disease as 4% of the population is directly affected (think six degrees of separation type networks to see how almost all of us can have a cancer story to tell). The post provides answers to some of the LAQs (least asked questions) and FAQs (frequently asked questions about cancer. A post from Stephan Grindley augments the cancer 101 with a straightforward commentary on breast cancer prevention and detection.

According to Charles Daney on Science & Reason, recent studies are making it increasingly apparent that cancer is really many different diseases and he explains how this means a new approach to understanding cancer at the molecular level.

More particularly covering cancer research, GrrlScientist offers an interesting take on the genetics of colour and cancer in Behold The Pale Horse and BayBlab discusses a recent publication in the journal Science on the subject of trans splicing and chromosomal translocations as well as the connection between chilis and cancer – preventative or protagonist?

HighlightHealth, meanwhile, discusses the implications of a large-scale, multi-dimensional analysis of the genomic characteristics of glioblastoma, the most common primary brain tumour in adults. On Hematopoiesis, we learn how travelling normal and malignant cells decide where to stay and on get linked up to five great talks from the experts.

Cancer vaccines are big news and none more so than the vaccine being offered to young girls to protect them from cervical cancer caused by HPV. Health blogger Grace Filby has posted on why this vaccination campaign is not a good idea given the lack of safety data currently available.

Orna Ross tells us about the good things she has gained from having cancer/ and points out that fighting cancer as if it were a battle is not the only approach to tackling the disease. Actorlicious meanwhile provides a star-studded perspective and how the famous and infamous are standing up to cancer.

A post from the University of Oxford science blog on exploiting the Achilles’ heel of cancer, describes how a new approach will lead to treatments with none of the common side effects of cancer therapy. And, Sally Church on the Pharma Strategy blog asks will Abiraterone impact survival in advanced prostate cancer?, the most common carcinoma in men. She also provides a fascinating insight into treating triple negative breast cancer.

Science Metropolis discusses how public health expert Dave Ozonoff hopes to use mathematics and chaos theory to explain paradoxical cancer frequencies, such as those seen in Cape Cod, where rates are 25% higher than the state average in Massachusetts.

Finally, one from the recent Sciencebase archives entitled (hopefully quite controversially) alcohol causes cancer.

Visit the Cancer Carnival site to read past carnivals, to get information on scheduled posts and to find out how to host your own cancer research blog carnival.

Alcohol Causes Cancer

Wine corks (Photo by David Bradley)It’s quite illuminating that the following study has not yet reached the wider media. Without wishing to be too cynical, I do wonder whether that’s because the journal in which the work is published does not use a highly aggressive press office and marketing machine like so many other medical journals, which never seem to be out of the news. The results in this paper are just as important and the implications perhaps even more far reaching than many other results that attract instantaneous (under embargo) media attention. Anyway, take a look and judge for yourself, oh and let me know afterwards if you think the headline for this post is way off mark.

Alcohol blamed for oral cancer risk – A large-scale statistical analysis of mouth and throat cancer incidence over a long period of time has looked at possible correlations between exposure to industrial chemicals, dust and alcoholic beverages in a wide variety of individuals in different occupations across Finland. The perhaps surprising conclusion drawn is that alcohol consumption rather than industrial chemicals or dusts is the critical factor associated with this form of cancer. Get the full story in this week’s edition of my SpectroscopyNOW column here.

I suppose it’s a little ironic that in the same edition of Spec Now, I’m also writing about how to make beer taste fresher and last longer on the shelf. NMR spectroscopy, and a chromatography sniff test have yielded results that could help brewers improve the flavour and shelf-life of beer thanks to work by scientists in Venezuela. The team has identified alpha-dicarbonyls as important compounds that reduce beer’s flavour and point to a new approach to brewing beer that stays fresher, longer. Take a sip here…

Meanwhile, another subject of mixed messages regarding health benefits is that perennial favourite chocolate. To maintain the seductive and lustrous brown gloss of chocolate, so enticing to chocoholics the world over, food technologists must find a way to prevent fat bloom from forming on the surface and turning the surface an unappealing grey. Now, scientists from Canada and Sweden have found new clues to understanding the microstructure of chocolate and what happens when it turns grey with age. More…

Finally, some straight chemistry with absolutely no hint of biomedicine, health, or pharmaceutical implications (yet). A novel structure studied using X-ray crystallography hints at the possibility of a carbon atom that, at first site seems to be a little different from the conventional textbook view. Could the oldest rule of organic chemistry have been broken at last, or is low atomic separation being equated too keenly with the presence of a bond, or could there be something else afoot, as Steve Bachrach suggests? Read on…

Agony agonists and cancer combatants

Chemweb logoIn chemistry news this week, The Alchemist learns about slow-release drug formulations that prevent drug abuse, the risks of war associated with using depleted uranium in munitions and armour plating, and the analytical benefits of red wine that could turn up on labels to guide consumers to the most healthful Chianti or Zindanfel.

Also, this week, a well to wheel analysis reveals that hybrid cars are not as green as you would think and that converting natural gas to hydrogen for use in fuel cells could be the best environmental option for transport. Finally, web-savvy chemists using the Firefox browser have a new tool available to them that offers inline entries from blogs while they read ACS, RSC, Wiley, and other journal tables of contents.

This week’s grant goes to Bassam Shakhashiri for pioneering work in engaging the public with science and for helping to rebuild education programs after decimation by Reagan funding cuts in the 1980s.

Do heavy metal fans get skin cancer

Denim jacketAs it is a holiday across the UK today, there is probably little need to warn Brits of the dangers of the sun’s rays, it’s usually so cold and wet, that the chances of frostbite and rust are much higher than sunburn. That said, summer is on its way and a paper in the latest edition of the Lancet medical journal warns that sunscreen and light cotton clothing are simply not enough to protect you from skin cancer caused by exposure to ultraviolet light from the sun.

Instead, the paper’s author suggest that anyone who dares to partake of the great outdoors should wear heavy cotton clothing such as denim, wool, or polyester, to block out those damaging rays. But, should this advice be well taken? Is the sun really to blame for the apparent increased incidence of skin cancer we hear reported or could it be that our car and desk bound sedentary lifestyles in which most people barely see the sun except on their foreign holidays are more to blame for compromising our immune systems and making us more susceptible to skin and various other forms of cancer.

We’ve covered this issue previously in Sciencebase, recent evidence points to a lack of vitamin D (manufactured in the skin during sunlight exposure) as being a much higher risk factor for various cancers than sun exposure itself.

The Lancet Review authored by dermatologist Stephan Lautenschlager of Triemli Hospital, in Zurich, Switzerland, analysed the various sun protection strategies used around the globe. “Wearing sun protective clothes and a hat and reducing sun exposure to a minimum should be preferred to sunscreens,” the team writes, “Often this solution is deemed to be unacceptable in our global, outdoor society, and sunscreens could become the predominant mode of sun protection for various societal reasons, for example healthiness of a tan, relaxation in the sun.”

The Review says that linen and loosely woven cotton represent less effective sun protection and that tightly woven, thick garments made of denim, wool or polyester offer the best protection; not exactly the kind of clothing anyone but heavy metal fans would want to wear on a scorching hot sunny day.

The paper points out that several studies have shown that sunscreen protects against acute UV skin damage and non-melanoma skin cancer, it is not known whether sunscreen stops melanoma developing. And, perhaps therein lies the rub, the connection between sunlight exposure and skin cancer itself is not as cut and dried as some commentators suggest.

“Suggesting wearing denim in hot weather is I think so stupid – it is very uncomfortable. Special clothing is not needed in the UK – on rare very hot days it is better simply to seek the shade – after some exposure to get your dose of D without burning, says Oliver Gillie of London-based lobby group Health Research Forum. He points out once more, that insufficient exposure to sunlight could be doing us more harm than good in terms of increasing cancer risk because of a lack of vitamin D.

“A link between heart disease and insufficient vitamin D is emerging,” he told Sciencebase, “and the National Heart Forum is interested in this aspect of the debate.” Given that until now the sunlight and skin cancer debate has essentially been a Cancer Research UK monopoly, it will be interesting to see how the heart charity approaches the issues.

There have been numerous other research developments that have not seen the media light of day. “There are links with infectious disease,” adds Gillie, “Vitamin D is important for maintaining immune system resistance a fact well-known to those treating tuberculosis a century ago and well before the advent of antibiotics.”

Cancer Research UK says that 90% of melanoma is caused by sun exposure. “This is a very contentious figure,” Gillie points out, “and is disputed.” He adds that it could be that as few as one in ten melanoma cases are caused by sun exposure. “Poor immunity is a big factor in melanoma and people who are on immune suppressing drugs e.g. transplant patients are at high risk,” he says.

Such observations certainly cloud the picture of sun exposure as the big skin cancer killer. He also points out that purported mechanisms for DNA damage and thence skin cancer formation based on the photochemistry of DNA itself no longer stack up because it is now known that melanin, the pigment that gives rise to a tan is a protective agent against the very mutagenic molecules thought to form on sun exposure. Indeed, Raymond Barnhill and colleagues writing in the Journal of the National Cancer Institute (2005, 97, 195-199) found that people with melanoma survive longer if they have more sun exposure. This is doubly ironic in that post-treatment melanoma patients are usually advised to stay out of the sun.

If the British weather is kind for once this Bank Holiday Monday, it will pour sunshine down on all of us. So, leave the denim at home, unless you are a heavy metal fan, and make sure your icecream doesn’t melt while you are sunning yourself.

Should you worry about HRT and cancer?

Menopausal womanA female friend of a friend started on hormone replacement therapy (to treat quite severe early postmenopausal symptoms, and on the advice of her GP to reduce the risk of osteoporosis). The symptoms have all but been relieved (although it’s difficult to separate out the effects of the HRT hormones themselves from the phytoestrogens she imbibes from soy milk and other related foods).

Either way, the recent Lancet paper, which received lots of media attention, got her all hot and bothered. She’s an earlier finisher, and is likely to be on HRT for ten years or so, is that going to mean she will get ovarian cancer. The tabloid hype surrounding the paper would seem to suggest so, but as with all statistical health studies that get pounced on by the media it’s worth taking a closer look.

Interpreting the results and scaling up to whole number women, as opposed to fractional women, over 5 years, ovarian cancer incidence for those who have never used HRT was 26 per 10,000. It was 30 per 10,000 for HRT users.

The researchers conclude that, “Women who use HRT are at an increased risk of ovarian cancer. Since 1991, use of previous has resulted in 72 additional cancers per year and 55 additional deaths in the UK.” Their results are based on the million women study, in which 500,000 were HRT and 500,000 were not.

Of course, ovarian cancer is the fourth most common cancer in women in the UK, with some 6700 developing the malignancy and 4600 dying from it every year. The high incidence of deaths is presumably down to the hidden nature of this form of cancer, which is often not detected until it has reached a lethal stage. 72 additional cancers and 55 additional deaths is a significant but not an enormous increase.

The researchers also add that, “In total, ovarian, endometrial, and breast cancer account for 39% of all cancers registered in women in the UK.1 and 2 The total incidence of these three cancers in the study population is 63% higher in current users of HRT than in never users (31 vs 19 per 1000 over 5 years, figure 6). Thus, when ovarian, endometrial, and breast cancer are taken together, use of HRT results in a material increase in the incidence of these common cancers.”

But, these are risk factors and there is simply no way of making any kind of prediction, with current medical knowledge, of whether or not a particular woman on HRT will suffer any form of cancer because of the HRT drugs she is taking. The researchers mention that as HRT use has declined in the US (partly because of the negative publicity it receives), we are also now seeing falling breast cancer rates there.

According to the author of the paper, Valerie Beral of Cancer Research UK, “It is a small but significant risk. It’s more an issue for women to think about how much they want to take HRT to relieve their symptoms against the known risks.”

However, it’s not all about hot sweats and sexual libido, as life expectancy rises in general and the aspirations of older people for a happy and active retirement rises concomitantly, it will be interesting to see whether a few less cancers will be offset by a rise in osteoporosis incidence and the other “side-effects” of the menopause (particularly early onset menopause).

An elderly neighbour of mine has been in and out of hospital with bone density issues and fractures repeatedly and at one point suffered a potentially lethal hospital-acquired MRSA (multiple-resistant Staphylococcus aureus) infection as a result. To my mind, she would most likely not have suffered in this way had she taken HRT during the early menopause. But, equally there is also the thought that had she died of cancer sooner than the osteoporosis kicked in, she would not have suffered bone density problems later in life either.

For every statistic, a counter statistic can be found and when the overall risks are very small it is difficult for the public, the media, and even the medical scientists to know for sure which way to push the agenda.

New treatments for COPD

COPD LungsA plea from a Sciencebase reader asking for more information on new treatments for COPD, chronic obstructive pulmonary disease, led me to do a search to find the specific novel therapy the reader mentioned. Apparently, there was a news item on US TV that referred to research in Mexico.

Well, my search turned up several new treatments for COPD. Medical News Today reported in January how combining a long-acting bronchodilator with an inhaled corticosteroid could reduce the number of exacerbations by 35%, but this was work carried out Germany, with no Mexican connection as far as I could tell. Then there were the more recent revelation that helium, the noble gas of squeaky voice fame, combined with 40% oxygen could increase the exercise capacity of patients with COPD by an average of 245%. Again, no Mexican connection, this time the research was Canadian.

A UK and Canadian collaboration has identified an inflammatory mechanism that could explain some of the most extreme symptoms and point to new treatments. Indeed, Imperial College’s Peter Barnes had shown previously that low doses of theophylline, a substance occurring in tea leaves can help relax the bronchial tubes in the lungs and render them more amenable to corticosteroid intervention than they would otherwise be.

It might be that one in ten of COPD flare-ups could be prevented by treating patients with antibiotics to rid them of the bacterium thought to cause these problems in a sub-group of patients.

COPD is the fourth leading cause of death in the US and in January this year the National Institutes of Health put up $13 million to the University of Pittsburgh to help researchers there understand better the disease and potentially find more effective treatments. COPD, some times known as chronic obstructive airways disease (COAD) is most commonly associated with smoking tobacco (you’ve got a hugely increased risk of this disease if you have smoked an average of 20 cigarettes a day for 20 years or more across your lifetime) but the disease can also arise because of coal dust and other pollutants. I say disease, but it’s actually a combination of diseases chronic bronchitis (which is inflammatory, in nature, narrows airways and increases mucus production) and emphysema (destruction of lung tissue).

Still no Mexico connection, not even with a search on NCBI PubMed… Then I received another email from the Sciencebase correspondent who revised the original note to include the word “new” it was New Mexico…not old Mexico. I should have thought of that first off, but I didn’t. However, a quick search with new included brought up the item that I suspect our correspondent had heard about.

Apparently, the Lovelace Respiratory Research Institute is collaborating with Dr Richard Crowell of the Albuquerque Veterans Administration Medical Center to begin a new study over the next three years that will enlist more than 3000 Albuquerque area residents at risk of COPD and lung cancer. Now, this isn’t quite the treatment breakthrough mentioned in the original email, but this looks like another promising lead in dealing with COPD.

Mobile Phones and Cancer

Mobile phones and healthThe UK Times paper reported on Saturday that a leading cancer researcher Professor Lawrie Challis chairman of the government-funded mobile telecommunications health research programme believes it is time that a large-scale study into the long-term risks associated with cellphone use.

Intriguingly, health and medicine writer Caroline Richmond pointed out that just such a study was actually published just three days prior to The Times article appearing.

The abstract for this paper by STUK, Radiation and Nuclear Safety Authority, Helsinki, Finland says:

“We conducted a population-based case-control study to investigate the relationship between mobile phone use and risk of glioma among 1,522 glioma patients and 3,301 controls. We found no evidence of increased risk of glioma related to regular mobile phone use (odds ratio, OR = 0.78, 95% confidence interval, CI: 0.68, 0.91).” The study encompasses digital and analog mobile phone use lasting ten years.

More than 200,000 volunteers and £3 million ($6m) of government and phone industry money will be needed to assess long-term risks of five years or so for cancer and Parkinson’s and Alzheimer’s diseases. Challis is currently negotiating for the necessary funding.

It is odd that this news story broke so close to the publication online in International Journal of Cancer. It also makes one wonder why there seems to be such a continued “hope” among certain segments of the media to find a correlation between mobile phone use and brain cancer. Surely, there isn’t an expectation that if such a correlation were ever demonstrated that the industry would cough up compensation to the literally millions upon millions of regular, long-term mobile phone users. Moreover, if such a demonstration were published might not a similar investigation raise concerns about other electromagnetic radiation sources again, such as powerlines, computer screens, microwave ovens and most recently wireless internet connections?

What do Sciencebase readers think? Would this be £3m well spent, or shouldn’t The Times simply publish a front page story about the STUK study, so similar to the one that Challis is after, that has already been carried out, peer reviewed and published.