Panorama to Planet

I just applied the Polar Coordinates distortion technique (discussed in this month’s Practical Photography magazine) to a panorama I took during the summer in the Isles of Scilly. Basically, you rotate a neatly stitched panorama through 180 degrees, then stretch it to make it square and apply “distort: polar coordinates”. A little bit of cloning to fill the corners with sky and then more cloning to “fix” the join. I added a solar flare to make it more planetary.

This was the original photo (scaled down for the blog post)

Heidelberg Thingstaette

The Heiligenberg is a wooded hill overlooking the town of Heidelberg in Baden-Württemberg, Germany. It rises to around 440 metres and has been the site of several historical buildings: a Celtic hilltop fortification, a Roman sacred precinct, several mediaeval monasteries, modern lookout towers and a Thingstätte, built by the Nazis in the 1930s. The latter is a rather chilling place, despite a hot, sunny day with lots of tourists and dogwalkers.

During the Third Reich, the Heidelberg Thingstätte open-air theatre was constructed in 1934/5 on the ridge between the Heiligenberg and the Michaelsberg as part of the Thingspiel movement. It is one of four hundred such venues planned, but only forty built. Today, it is once more in use as a venue for open-air events.

 

Airy discs and keeping it sharp

In optics (and thence photography, microscopy, and telescopy), the Airy disc is the optimally focused spot of light that a perfect lens with a circular aperture can make. It is the diffraction limit. It’s named after George Biddell Airy who wrote a detailed description although astronomer John Herschel had described the phenomenon when observing a bright star through his telescope.

Rubinar-1000 plus 2x K-1 telekonv Airy disk 1The Airy disk is a bright spot of light surrounded by concentric diffraction rings, all together they are referred to as an Airy pattern. The wavelength of the light and aperture size of the lens is critical to the size of the resulting pattern.

Airy disk D65

The old pinhole camera is at the diffraction limit, almost a point-like circular aperture. Due to this diffraction effect, the smallest point to which light can be focused with lens (or mirror) is the size of the Airy disk. Of course, lenses are not perfect and apertures are rarely circular, in a lens for an SLR and other types of camera they are usually made up of an array of six overlapping fins, (sometimes more, sometimes less. More means more circular and so better, and TV and cinematic film cameras often have 8 fins and so produce octagonal, rather than hexagonal bokeh. 8-finned cameras seem to have a much-improved image quality over more those with a more conventional 6-finned aperture.

Anyway, if Airy discs, light’s wavelength, and the lens aperture conspire to produce a diffraction limit, then it is pixel size in your camera’s sensor that “sees” this limit. It’s possible to calculate the diffraction limit. So, if your lens can be set to an aperture of f/2 (that’s the biggest aperture), the diffraction limit for green light with that aperture is about 2.7 micrometres. Dave Haynie discusses this in more detail here.

Now, f/2 is a low f-stop for most lenses. The Sigma 150-600mm with which I have photographed birds recently using my Canon 6D, can be set to f/5 when it’s at 150mm focal length, but only as low as f/6.3 at 600mm. That’s the biggest apertures it can manage. A larger aperture means more light in and exposure balanced against shutter speed and ISO number. My 90mm Tamron macro lens with which I have been photographing moths, has its biggest aperture at f/2.3.

Larger aperture means a smaller depth of field. The parts of the image that are closer or further away than the point at which you have focused the camera will be out of focus with a larger aperture (smaller f-stop). If you want a larger depth of field, then you need a smaller aperture, which means less light and critically from the perspective of sharpness, you begin to approach the diffraction limit. This occurs because of the Airy disc effect and how that coincides with the pixels on your camera’s sensor. To get a sharp image, you need the Airy Disc to be smaller than a pixel, realistically smaller than 2-3 pixels, explains Haynie. If you make the aperture bigger the Airy disc becomes bigger and so each perfect point of light will inevitably traverse a larger number of pixels, which is not what you want. Rather, you want each pinpoint of light from the object you are photographing to impinge on a single pixel.

This is where balance and compromise must come into play. A smaller aperture gives a larger depth of field, which is more important when doing close-up macro photography of small objects such as moths. So, you push the f-stop to a higher number to get a greater depth of field. Now, with small aperture, you are approaching that Airy problem. If you have a point-and-shoot camera, the sensor is only a few millimetres across, a two-thirds sensor (common on consumer-level dSLRs) is a lot bigger, although still smaller than the full-frame (35mm) sensor of professional dSLRs, and of course even that is a whole lot smaller than a medium-format digital back. (All of this feeds into why the highest quality photography, even in terms of film cameras) is often most associated with medium and large format.

Okay. So smaller aperture means a larger depth of field, but that means a bigger Airy disc, which means you need larger pixels (and the same number) to overcome the diffraction limit and get a sharper, better quality image.

Haynie has a Canon 60D, which he says has 4.3 micrometre pixels size. The Airy problem doesn’t arise at f/2.0, which such a camera. However, the pixels in older Smart Phone cameras are a lot smaller, perhaps 1 micrometre on a tiny sensor chip in order to cram as many as the market demands on such a small area. This means sharpness can be very limiting in older phones and many modern ones too. HTC and Apple have actually increased the size of the pixels on their sensors rather than increasing the megapixel count to overcome the Airy problem to some effect. Megapixel count always was marketing BS, anyway, because of all of the above and many other factors. Cheaper cameras (point and shot and/or phone) don’t have an aperture control or if they do it’s f/2 to a minimum aperture size of about f/4. You won’t be able to push it to f/8 or anywhere useful for depth of field. The size of the sensor and the pixels crammed in always mean passing the Airy border.

For that Canon 60D, stopping down to f/8 approaches the boundary as the Airy disc is about 10.7 micrometres at this aperture, stop to f/11 and it is 14.3 micrometres which is definitely larger than the width of 3 pixels on this camera. Contrast this with my Canon 6D, which has a full-frame (35mm) sensor. The pixels are a little over 6.5 micrometres and so I will be safe from Airy up to f/11. Take it to f/16 and it crosses the boundary. I reckon f/8 or f/9.5 would be the sweet spot for my moth macro setup. Assuming there’s sufficient light to keep the ISO low to avoid noise and the shutter speed short enough to avoid camera shake. I could use a tripod and remote shutter release with mirror lockup but that’s quite cumbersome when chasing small moving targets like moths. I do have the option of using Tamron’s onboard image stabilisation, which is worth two stops of shutter speed, so I can keep shutter long enough to let sufficient light in to avoid high ISO without introducing too much camera shake.

Your mileage will vary depending on what camera you are using. The Cambridge in Colour site has a more detailed explanation of Airy discs and a table to help you work out the optimal f-stop for your camera model. When you fill the form in it also simulates an Airy Pattern on your sensor, so you can see whether you’re at the limit with your camera for a given f-stop. f/8 is often considered a sweet spot, balancing reasonably large depth of field with minimal aberration due to Airy disc effect. The diagram below generated on the Cambridge site shows why this is the case.

Photographic refurbishment

I’ve spent far too long today hacking up my Imaging Storm website to make it more usable in terms of its photo galleries. Totally changed the way they function to make them better on desktop and mobile. By the way, if Sciencebase is my “Science, Snaps, and Songs” site, then Imaging Storm is definitely the “Snaps, Songs, and Science” site. There isn’t really a Songs, Snaps, and Science permutation yet, nor even a “Songs, Science, and Snaps” option. You have to just visit my BandCamp for the music.

Anyway, I’ve split the bird galleries into obvious categories: Perching birds, Seabirds, Waders & Waterfowl, Birds of prey, and Misc. I’ve also added a specific gallery for moths and butterflies for which the number of photos of different species I have is growing fast this week as regular readers may have noticed. I’ve also teased apart the wildlife gallery into mammals, non-mammalian vertebrates, and other invertebrates.

Be really nice if you could pay a visit to this sibling site of Sciencebase! Thanks.

https://imagingstorm.co.uk

Gulls jus’ wanna have pun

Gulls just want to have fun, A gull that can’t say no, Only gulls allowed, The it gull…

A real gull’s gull, Funny gull, Party gull, A daddy’s gull, One of the gulls, Good gull, Cover gull, Gull Friday, The gull next door, Couldn’t happen to a nicer gull…

Little gull’s room, That’s my gull, Working gull, Poor little rich gull, Big gull’s blouse, Call gull, Atta gull, What’s a gull supposed to do?, Guys and gulls…

A slip of a gull, Big gull pants, Old gull, Gull problems, Gull’s time of the month…

Poster gull, Page-three gull, Blue-eyed gull, Glamour gull, Same as the next gull…

Gulls’ night in, What are little gulls made of? Any other gull, Night out with the gulls…

More gulls and other birds and more in my Isles of Scilly gallery on Flickr. There are also my more serious blog posts about IOS with photos.

Isles of Scilly – Birds, beer, and boats

I started a blog post about the Isles of Scilly (#IOS) while we were island hopping there in July 2018, I was originally going to call it “Cornwall on Steroids”. My muso mate Graham gave us some pointers on IOS and he calls it Cornwall Plus. I was going to half-inch his idea but misremembered it under the influence of turning tides and Tribute.

However, my phone’s autocorrect was quite enthusiastic and fixed my draft title to “Corneal Streisand”. So, here we are a roundup of the various posts I’ve written since we got home with a few of my snaps (the full public gallery is on Flickr and a select few on Instagram).

Birds on the Isles of Scilly – Does what it says on the label.

The Seventh Seal – short post and photos about the grey seals we saw on the Eastern Isles IOS.

The piratical bird called Bonxie – Spotted a Great Skua on a pelagic trip on the Sapphire out of Hugh Town, St Mary’s, IOS.

St Martin’s Daymark – The daytime “lighthouse” with no light on St Martin’s Island, IOS, visible from mainland Cornwall and originally erected in 1683.

Manks Puffins – The reason the scientific name for the Manx Shearwater is Puffinus puffinus and not the Puffin, which is Fratercula arctica.

Gulls just want to have pun – Hmmm…gull puns…

The Seventh Seal

…actually, it was probably the 27th seal. We saw quite a few on a boat trip from Hugh Town on St Mary’s to the eastern isles of Scilly aboard Sea King skippered by Fraser Hicks. There were lots of adults and pups of the large species known as the grey, or Atlantic, seal (Alichoerus grypus, meaning “hooked-nosed sea pig”). Of course, seals are more closely related to otters and bears than pigs although their resemblance to dogs, and cats even, is often commented on. It’s evolutionary convergence, I believe, although otters and bears, cats, dogs and seals all share a common ancestor if you follow the branches of the family tree back far enough.

There are two sub-species of grey seal, A. g. atlantica (found on both sides of The Atlantic Ocean) and A. g. grypus (found in the Baltic Sea). However, the genetics suggests that the eastern and western Atlantic populations are distinct and have been for at least one million years, and so might also be seen as separate subspecies. The western Atlantic grey seals (or should that be gray seals?) are much bigger than members of the eastern population:

Western: Males grow up to 400 kg, females 250 kg.
Eastern: Males max out at ~310 kg and females ~190 kg.

They’re fascinating creatures and very photogenic. But, it’s with some sadness that among my photos from the trip is one of a seal pup with what looks like some nylon webbing from a crab pot entangled around its neck (see photo below). It looks as if the webbing has cut through the skin and blubber although there is no obvious bleeding, so presumably, the animal has been encumbered with this flotsam for quite some time. It is difficult to know whether it will survive into adulthood. We were in a boat with no possibility of getting close to the rocks to disentangle the animal. There were snorkellers in the water, but whether or not they could safely get to the animal is a moot point too.

A piratical bird called Bonxie and the Blue Shark

We went on a pelagic trip in the Isles of Scilly with Sapphire skipper Joe Pender, departing Hugh Town harbour, St Mary’s Island on 9th July 2018 at about 5pm. Within seconds we were being tailed by dozens of Herring Gull.

Engines were cut about an hour out to sea and the anglers aboard began flicking their rods to catch mackerel, which they did, a dozen or so quite quickly. Then the fishing for Blue Shark (Prionace glauca) began. An 83-year old angler hauled in the first (with a little assistance from crew and fellow anglers to get lines around and from under the boat). The catch was a 2.3 metre specimen, it was photographed, scientifically tagged*, and returned to the waves largely unscathed, but perhaps a little confused. I must admit, you could almost see the fear in its eyes while they were doing the weights and measures and shoving the tag under its skin!

Blue Shark, Prionace glauca
Blue Shark, Prionace glauca

The older birdwatchers aboard jeered some of the subsequent efforts. But, by the end of the fishing it was a draw, 6 landed, 6 that got away.

Anyway, the birdwatching, was not quite the numbers game we had hoped for, but aside from the dozens of Herring Gull, we saw lots of Gannet, many over the boat and a distant flock diving on a patch of water where dolphins were also feeding. We had a few Fulmar and about the same number of Manx Shearwater (aka Manks Puffins).

The skipper called out another bird as it crossed our stern and I snapped at it as quickly as I could. I didn’t catch what it was at the time, I thought I heard him shout “Manxie!”. But, back home and on dryland with my laptop I could see it was a Skua that I’d photographed. The Facebook bird ID group called it out – it’s a Bonxie – a Great Skua (Stercorarius skua). Bonxie is a Shetland name for the bird probably a word of Norse origin. Skuas are piratical birds, they will steal food from other birds. But, they’re also predatory, and the Great Skua is capable of killing a kittiwake. Stuart Keenan on that Bird ID group tells me he’s seen one in Wester Ross kill and eat a first-year Great Black-backed Gull! In the same Facebook thread, Mike Honeyman told me that the Bonxies used to have a fairly good crack at the warden team on Fetlar. “We were suitably nervous in their vicinity!” he writes.

So, the Great Skua, a lifer for me, even if I didn’t get a decent shot. I wasn’t quick enough to get a focus lock on this bird as it crossed the stern of our moving boat, when the skipper shouted. The subsequent photos were reasonably sharp as it flew away but underexposed against the bright evening sky as, again, I wasn’t quite quick enough to adjust.

*UPDATE: 2024. The scientific work is important even if a few sharks have to be hauled from the water to be tagged.

The Mediterranean Blue Shark, a species critical to the marine ecosystem, is facing the threat of extinction due to overfishing and a lack of proper conservation efforts. A 2024 study explored the genetic differences between specimens in the Mediterranean Sea and the Northeast Atlantic Ocean to understand if they are separate populations. The results showed subtle genetic differences, suggesting that the Mediterranean sharks are largely isolated from Atlantic populations. This separation means they rely on local populations for survival, with limited new sharks coming from the Atlantic.

This has important implications for conservation. Current management often treats Blue Sharks as a single population, but this overlooks the unique risks facing the Mediterranean sharks. Overfishing in this region could push them closer to extinction, especially since they reproduce slowly and are not being replenished from elsewhere. Protecting these sharks requires more targeted conservation strategies and international cooperation.

This research is vital not only for blue sharks but for understanding how fishing and environmental changes affect marine ecosystems as a whole. Safeguarding such apex predators is essential for maintaining the balance of marine life.

I don’t know if Pender’s tags are specifically part of the data for this particular study, but they do feed into the bigger picture of Blue Shark movements in the Atlantic.

St Martin’s Daymark

There is a large red and white striped object on the Scilly isle of St Martin’s, you can’t miss it if you visit. It’s an obvious destination when hiking the island and a great attractor for a nice photo of the island from a boat. But, what is it?

Well, it’s a daymark…

…basically a daylight hours beacon for mariners.

The daymark on St Martin’s sits on its northeast corner and was erected in 1683 by Thomas Ekins, first steward of the Godophin Family to live on the islands. It is a rendered granite circular tower (4.8 metres in diameter and 6.4 m tall) with a conical top taking it to 11 m tall. It was originally painted white (until 1822). By 1833 it was being painted red but is now painted with red and white bands to make it more visible in any weather, you can see it from the Cornish mainland if the weather and light are right. The St Martin’s daymark is a Scheduled Ancient Monument.