Let’s Get Physical, Right Now

The latest issue of the monthly Spotlight column over on the physical sciences section of Intute is now online, this time featuring research from the earth sciences, the greening of chemistry in the developing world, and humans acquitted over Neanderthal extinction.

Cassava by David MonniauxChemists go veggie

Chemists working on tight budgets in developing countries may be able to swap flasks of laboratory reagents for extracts of celery and potatoes, or cassava and carrots and other inexpensive, …

Neanderthals more than severely put out by bad weather

Climate change saw off the last of the Neanderthals from their final stronghold on the Iberian peninsula thousands of years ago, according to …

Slumbering Yellowstone snores

Beneath the beautiful Yellowstone National Park in Wyoming lies a slumbering giant, a supervolcano who wakes every few hundred thousand years and wreaks havoc across hundreds of …

Viruses Do Not Eat Spaghetti

BacteriophagesThe faint glow from a single molecule combined with a stretch from “magnetic tweezers” could help scientists get a grip on how viruses that infect bacteria, so-called bacteriophages pack up their DNA. The research could lead to a resurgence of interest in the West for a potent treatment for infection that uses bacteriophages instead of antibiotics to attack disease-causing bacteria. The treatment side-steps the problem of bacteria evolving resistance to antibiotics because the agent of bacterial death can evolve just as quickly to cope with any defences put up by the bacteria.

In the face of deadly emergent bacteria such as Escherichia coli O157, multiple-resistance Staphylococcus aureus (MRSA) and Clostridium difficile, there is renewed interest in this alternative to antibiotics. The same study might also lead to new insights into how to combat viruses that infect people too, including herpes and adenoma viruses.

Many viruses use a self-assembly stage in which a powerful molecular motor packs their genetic code into the viruses’ preformed protein shell, its capsid. Now, Carlos Bustamente and colleagues at the University of California, Berkeley, have demonstrated that the genetic code is not coiled up like so much spaghetti on a fork but is packed using a concertina type approach. You can find out more about the details of this work in the current news round-up on SpectroscopyNOW.com

People caught pubic lice from gorillas

GorillaNo, it’s not some kind of deviant gorillas in the mist story, apparently, millions of years ago our ancestors picked up pubic lice (crabs) either by sleeping in gorilla nests (without the gorilla) or through eating our silver-backed cousins. David Reed and colleagues at the University of Florida publish details of their findings today in BMC Biology journal.

Reed is quick to point out that there was no monkey business between gorillas and humans. Of course gorillas are apes not monkeys, but this would be a perfect story for Ricky Gervais podcast star Karl Pilkington. “It certainly wouldn’t have to be what many people are going to immediately assume it might have been, and that is sexual intercourse occurring between humans and gorillas,” Reed says, “Instead of something sordid, it could easily have stemmed from an activity that was considerably more tame.”

Reed suggests that 3.3 million years ago, gorilla lice took up residence in the pubic region in our ancestors, this was probably around the same time that evolution took us from a fully hirsute state to our current nakedness. With no hair on our bodies other than the head and pubic regions, the lice would have been hard pushed to linger anywhere else.

Mass debate on stem cell research

Embryonic stem cellsJust £300,000 (about $600k) is being plugged into a national public debate by the UK government on stem cell research. According to Science and Innovation Minister Malcolm Wicks the UK’s two major public funders of stem cell research will use the cash to run a national public discussion about this cutting-edge area of science.

The Biotechnology and Biological Sciences Research Council (BBSRC) and the Medical Research Council (MRC) will receive the funding as part of the government’s ScienceWise initiative. The aim will be to find out what are the public’s concerns, views and attitudes to this face-most moving area of science. It will also provide a forum for revealing the challenges that researchers face and the potential benefits of stem cell science.

At today’s launch Wicks said: “The Government believes that stem cell research offers enormous potential to deliver new treatments for many devastating diseases where there is currently no effective cure. Huge numbers of people are affected by these diseases and Britain is a world-leader in stem cell research. But there must be a proper dialogue with the wider public on the future of stem cell research. We need to raise public awareness about the potential opportunities
and challenges in this area.”

One key element of the initiative is to raise awareness of the world-class stem cell
research being carried out in the UK, at centres such as Newcastle University, and the progress being made towards practical treatments.

BBSRC’s Julia Goodfellow added, “It is essential that scientists working in areas such as stem cell research engage in a real dialogue with the public. The new programme will give scientists, funders and the government up-to-date information on what the public really think about stem cell research while giving people the chance to voice their views and concerns.” So, basically repeating what Wicks said. The MRC’s chief Colin Blakemore, had a slightly different slant. “Scientists who work
on stem cells want to ensure they maintain the trust and support of the public for their research,” he said. “But to achieve this, we need to explain what work is being carried out and why it’s being done.”

So, is £300,000 enough to do the job? Compare this with the ludicrous amounts of money available to anti-science type lobby groups which amount to millions and it really does look like a pittance. Half of that amount could easily be eaten up by an independent designer putting together a corporate logo for the project and the other half will have gone on snacks and wine for the launch party buffet, or am I being far, far too cynical? You tell me.

Natural Family Planning

Natural family planningCould the contraceptive pill be replaced by a “natural” approach to family planning? It could if a study by Petra Frank-Herrmann of the Department of Gynaecological Endocrinology at the University of Heidelberg, Germany, proves reproducible (pardon the pun).

She and her colleagues have demonstrated that using two indicators for the fertile period in a woman’s menstrual cycle and avoiding unprotected sex during that time is just as effective as the contraceptive pill for avoiding unplanned pregnancies. The study was published in Human Reproduction this week.

The symptothermal method (STM) uses temperature and cervical secretion to pinpoint a woman’s fertile time. The German team carried out the largest prospective study of the method yet and found that if couples abstained from unprotected sex during this time the rate of unplanned pregnancies per year was 0.4% and 0.6% respectively. Out of all the 900 women who took part in the study, including those who had unprotected sex during their fertile period, 1.8 per 100 became unintentionally pregnant.

“For a contraceptive method to be rated as highly efficient as the hormonal pill, there should be less than one pregnancy per 100 women per year when the method is used correctly,” Frank-Herrman explains, “The pregnancy rate for women who used the STM method correctly in our study was 0.4%, which can be interpreted as one pregnancy occurring per 250 women per year.”

The authors were also surprised by the relatively low rate of unintended pregnancies (7.5%) among women who had unprotected sex during their fertile period. ‘If people are trying for pregnancy you expect a pregnancy rate of 28% per cycle,’ said Frank-Herrmann. ‘Therefore, we think that some of the couples were practicing conscious, intelligent risk-taking, and were having no unprotected sex during the few highly fertile days, but had unprotected intercourse on the days at the margins of the fertile time when the risk of pregnancy was lower.’

Antioxidant buzz

Honey beeBees making honey from honeydew rather than nectar produce a sweet material that has greater anti oxidant properties than nectar honey, according to a study of 36 honey samples from Spain with different floral origins. The study published this month in the Journal of the Science of Food and Agriculture could point to a way to improve the health benefits of this natural sweetener.

The composition of honey depends greatly on where honeybees collect their raw materials. There are two key sources. Honeybees can collect nectar from flowers, and this generates nectar honeys or they can collect fluids exuded by plants, honeydew.

‘Honey is a natural source of antioxidants, and among honeys, honeydew honey is the best,’ says researcher Rosa Ana Pérez, who works at the Instituto Madrileño de Investigación y Desarrollo Rural, Agrario y Alimentario, in Madrid, Spain.

Each of the 36 honeys was exposed to a range of physical and chemical tests. Honeys with high antioxidant properties also had high total polyphenol content, net absorbance, pH and electrical conductivity.

‘These laboratory results show some aspects that people could use to get an idea about which honeys are likely to have the most potent antioxidant properties,’ says Pérez.

Oxidation is a chemical process in which electrons are transferred from from one substance to an oxidizing agent. Antioxidants are basically compounds that slow the rate of oxidation and are as important the chemistry laboratory as they are in the human body. Antioxidants work either by reacting with intermediates and inhibiting the oxidation reaction directly, or themselves reacting with the oxidizing agent and acting as a molecular decoy to prevent the oxidation reaction from occurring.

All living things try to sustain a reducing (the opposite of oxidizing) environment within their cells to prevent damage by oxidation of their biomolecules. Compounds such as glutathione and ascorbic acid (vitamin C) as well as enzymes (peroxidases and oxidoreductases) act as antioxidants. If you do not have adequate levels of antioxidants in your body then oxidative stress and cell damage can occur. More controversial is the notion that supplementing with antioxidants a balanced diet of fruit and vegetables has any additional benefits, claims of anticancer effects and reduced risk of cardiovascular disease have yet to be proved. Indeed, excess of certain antioxidants can do more harm than good.

Sex doesn’t sell

Sex on TVPeople won’t remember your brand if you advertised during a TV show with a lot of sexual content, according to UK researchers, compared to ads that appear in similar programming with no sex.

This was the key message that came from research carried out at the Department of Psychology at University College London by Ellie Parker and Adrian Furnham. They publish details in this month’s issue of the journal Applied Cognitive Psychology.

The team also discovered that men recalled the brand of products whose adverts contained sexual images more often than did women, in fact, the women in the study were actively put off by sexual content in advertising.

Is any of this particular surprising? If you’re watching a sexy movie are you going to be concerned with remember which brand carpet shampoo they advertised during the commercial break. More to the point, given the length of the ad slots on TV these days, it’s quite possible that viewers simply get “couply” during the breaks, inspired by the images they saw before the carpet cleaner and dog food came on.

Of course, the actual study didn’t allow for any extra-ad coupling. Instead, 60 university students (30 men and 30 women) aged 18 to 31, mean age 21, were divided into four groups. One group watched an overtly suggestive episode of Sex and The City, with sexy adverts running during the breaks. The second group watched the same episode with non-sexual adverts. The other two groups got to see an episode of ‘Malcolm in the Middle’ which contained no sexual references, with either sexual or non-sexual adverts.

‘The fact that recall of adverts was hindered by sexual content in the shows suggests that there is something particularly involving or disturbing about sexual shows. Interestingly this is something that is also found in shows with aggressive content,’ says Furnham.

‘Sex seems to have a detrimental effect on females recall for an advertisement,’ says Parker. ‘Sex is only a useful advertising tool when selling to men.’

But, couldn’t it simply be that the ads were simply more interesting than Malcolm in the Middle. Now, if it had been an episode of Friends, things would have been entirely different, all sixty volunteers would either have switched off or fallen asleep.

Viagra and steroids

Viagra stanozolol structureSciencebase reader Toar Winter emailed with a rather intriguing question.

Baseball star Rafael Palmeiro tested positive for anabolic steroids in August 2005 after telling the US Congress he had never taken such drugs before and was banned for ten days. He still insists he did not take steroids, or that if he did they were ingested through unprescribed supplements that contained stanozolol, the actual substance for which he tested positive.

Stanozolol is an old steroid and a test for its illegal use in sport has been used successfully for many years. It would actually make little sense for any sportsperson to cheat using this particular drug as it is detected so easily. This is especially true given the plethora of alternative, including human growth hormon (HGH) for which current testing methods are not quite so efficient.

So, back to Winter’s question. First, he points out that Palmeiro’s only advertising sponsor is Viagra, then asks whether or not it could be Viagra that produced a “false positive” for the steroid. After all, there is certainly some overlap between the effects and side effects of viagra and certain steroids. Winter, wants to know whether or not Pfizer in developing Viagra initially altered the structure of stanozolol slightly to produce a ‘different’ drug with similar or more directed effects.

As far as I know this is not the case. Pfizer was developing a drug for angina and high blood pressure in the late 1980s when it discovered that male volunteers in its clinical trials were seeing a rather outstanding side-effect of the drug. They’d actually based their leads on a known, but unmarketed, allergy drug Zaprinast, which inhibits the enzyme phosphodiesterase. The rest is history. This compound is not related to stanozolol as far as I know. If any readers can affirm otherwise, please leave a comment or email me.

Winter’s line of reasoning, however, is intriguing nonetheless. “Think about it,” he says, “not many athletes in today’s world are of the age where Viagra is needed, so drug testing probably wouldn’t detect many offenders.

It’s an intriguing idea, but I don’t think Winter’s theory stands up to close scrutiny. If it did, wouldn’t it be ironic that many of those same (elder) Congressmen pointing the finger at Palmeiro would have also shown positive in the same test?

Meanwhile, in other news, Pfizer has lost its battle to name the Chinese brand Viagra, “Wei Ge” (according to http://www.chinacourt.org/). The phrase is commonly used in China, where copycat generics out sell the real thing, but Guangzhou Welman, a Chinese ED drug maker already registered this name and the courts have said it should be allowed to retain the rights to it. I’m sure at least one regular reader of the Sciencebase blog will be able to tell us the origin of that name…

A Good Delusion

Evolutionary biologist Richard Dawkins continues to wow them Stateside with his book The God Delusion. Recently, he appeared on Stephen Colbert’s show to discuss the fundamantal differences between a rational scientific perspective of the universe and the nature of reality and the irrational viewpoint Colbert supports.

Dawkins, with good humour, attempts to argue his corner with Colbert who stubbornly insists that invoking God provides a much simpler explanation of the universe and man’s place in it than a Big Bang and Darwinian evolution. Dawkins points out that, “You get to complex like a human being by slow gradual degrees, and that’s the only ultimate explanation that will work. You can’t just suddenly magical complex things like God into existence,” he adds.

Life is not due to random chance, that’s the one thing it isn’t, because Darwinian natural selection is the exact opposite of random chance, it’s a highly non-random process, Dawkins further explains, “The big thing that everybody misunderstands about Darwinism is that it’s not an accident, it’s too complex to be an accident.”