Top 5 scientist blogs

technorati ranking

I suspect some scientists, like some science writers, you might say, have toooo much time on their hands. Nature’s Declan Butler trawled the Technorati blog directory for blogs written by scientists and found that of the 45 million or so blogs it lists at least five scientists’ blogs that make it into the top 3,500.

“There is little agreement about how to rank blogs,” Butler says, “no method is perfect.” He adds that given the huge number of blogs, there will no doubt be omissions. The exercise is, he says, best viewed as “a rough snapshot”. Nevertheless, the results demonstrate (somehow, the press release doesn’t say) that there has been a rapid increase in popularity of scientists’ blogs, and reveal several lessons for science bloggers hoping to get noticed.

I asked Butler about his motive for assessing science blogs in this way, “My idea was really just to get some idea of where science blogs stood in the blogosphere, and also draw attention to the issue of blogging in science,” he told me.

Anyway, here are the Top 5 Science Blogs according to Butler’s Technorati analysis:

179th Pharyngula http://scienceblogs.com/pharyngula

1,647th The Panda’s Thumb http://www.pandasthumb.org

1,884th RealClimate http://www.realclimate.org

2,174th Cosmic Variance http://cosmicvariance.com

3,429th The Scientific Activist http://scienceblogs.com/scientificactivist

Intriguingly, at least two of those Top 5 science blogs is aimed at quashing the pseudoscience claptrap spouted by the extremists in the intelligent design, creationist and reactionary religious movements. All five of those discussed appear to provide a sensible view of various issues with which science is concerned and provide beacons that might see us out of the dark ages of the present anti-science stance many bloggers are taking today.

(Just for the record your very own sciencebase.com comes in at a rather respectable 852nd, although it was about 605th a couple of weeks ago, so not sure how valid their trackback algo really is, to be honest).

Scientific Rock Band

Regular readers may have noticed I’m in a list-making mood these last few days, with the NMR acronyms feature and “what scientists are known for” posts…well over on The Island of Doubt, fellow science writer James Hrynyshyn is discussing the issue of the scientific ethic in rock and mentions the likes of Talking Heads, Rush, and Thomas Dolby as being hot on science.

Well, it got me thinking about actual artist names that betray a hint of the technophile or the science-minded among the muso crowd, so here’s a short list…in no particular order:

Chemical Brothers (chem)
We are Scientists (gen)
Cure (med)
EMF (tech)
X-ray Spex (tech)
AC/DC (tech)
Spock’s Beard (sci-fi)
Bio-Com (bio)
Medicine Head (med)
Television (tech)
10cc (bio)
UFO (sci-fi)
TLC (chem)
Atomic Kitten (phys/bio)
Atomic Rooster (phys/bio)
Transister (tech)
Quantum Jump (phys)
William Orbit (astro)
Oxide and Neutrino (chem/phys)
Suzanne Vega (astro)
Quake (geo)
Tenth Planet (astro)
Mercury Rev (chem/astro)
Electronic (tech)
Quartz (geo)
Electric Light Orchestra (tech)
Neil Diamond (geo)
Multi Purpose Chemical (chem)
The Dead Science (formerly The Sweet Science) (gen)
Electric Soft Parade (tech)
Death Comet Crew (astro)
Nuclear Rabbit (phys)
Electric Prunes (tech)
The Mars Volta (astro)
Radiohead (tech)
Van Der Graaf Generator (tech)
My Chemical Romance (chem)
Chemical People (chem)
Electric Six (tech)
Mind Science of the Mind (gen)
Flux Information Sciences (info)
Skin (derma)
Scientist (gen)
Eat Static (tech)
Echo and the Bunnymen (audio)

Noesy Spectroscopists

Who says chemists don’t have a sense of humour, if you haven’t already seen Paul May’s Silly Molecules site check that out right now, but in the meantime some genuine acronyms from the world of spectroscopy

Insensitive Nuclei Enhanced by Polarization Transfer (INEPT)

Combined Rotation And Multiple Pulse Spectroscopy (CRAMPS)

HOmonucleaR ROtary Resonance (HORROR)

Nuclear Overhauser Effect SpectroscopY (NOESY)

COrrelation SpectroscopY (COSY)

Slice Interleaved Depth Resolved Surface Coil Spectroscopy (SLITDRESS)

Proton Enhanced Nuclear Induction Spectroscopy (P…you got it), which is often hyphenated with the next technique in the style of separations scientists who couple HPLC with ESI/MS and LC with DAD. Do I have to spell it out? We’d have P-V or V-P for that matter, depending on which technique came first.

Variably Adjusted Gamma Inhibiting Nuclear Association Spectroscopy (Okay, I made that one up, but I’m sure a spectroscopists somewhere is working on something similar), Hyphenated 2D versions of either this or the previous proton technique would be P-P and V-V.

There are many others including, CYCLOPS, HOHAHA, ROESY, SECSY, PASADENA, EXORCYCLE, DANTE, TOSS, INADEQUATE, ENDOR, FOCSY, HERPECS, DEPT, feel free to use the acronym search tool to validate the more suspect ones if you don’t trust me. Enter the acronym or abbreviation of interest in the yellow box on the right of that page and hit the GO button next to the phrase “Science Acronyms”.

Hydrogen Atom Scale Model

This has to be the biggest of small web pages. It’s scalled so that one electron in a hydrogen atom is a single pixel on your computer screen and the proton is 1000 pixels across. Try scrolling across one page at a time to see just how far that electron is from the proton. It will take you quite some time, to say the least as there’s a gap of 11 miles between them!

Hydrogen Atom Scale Model.

Whatever you don, just don’t try to print the page.

Scientists are known for…

Inspired by orcmagazine.com’s racial profiling site Google
your race) in which they list the results entirely out of context of searching Google
with the phrases "white people are known for", "black people are known for",
"Hispanics are known for" etc etc, we thought we’d give it a try with the phrase
"Scientists are known for". Some interesting results emerged, all of them
totally out of context and not necessarily meaning what you think they mean, but
interesting in some strange way nevertheless.

Scientists are known for…

  • their sense of humour
  • their ability to share their insights
  • their love for painting and music
  • being concerned more with basic research than
    commercialization
  • refusing to accept medicine or treatment by doctors
    (admittedly it was Christian Scientists in this case)
  • keeping long hours
  • their expertise in such areas as cytogenetics
  • their lucid and elegant prose (in fact it was few
    social scientists)
  • challenging conventional wisdom and changing our
    world for the better
  • their assertiveness, self-promotion, and high
    degree of self-confidence
  • their intuitive models
  • being precise

Later, we’ll Google another job to find out what Google really thinks of you…

Open access chemical interview

The latest issue of the Reactive Reports chemistry news site is now live. In it, I discuss various advances in the chemical sciences including weighty issue of trans fat that has butter lovers everywhere declaring, “I told you so!” Also in issue 56, I report on the basic approach to chemotherapy that side-steps the need for a magic bullet and find out how NASA has lit a fuse under the planetary carbon debate.

Our reactive profile this month is Will Griffiths. Griffiths a chemist by training like me opted out of the lab early in his career with the aim of applying his chemical knowledge and expertise through an altogether different medium. He is now investing his time and energy in developing the ChemRefer.com website, which offers chemists every quick and open access to the free full-text chemistry literature. You can use this search tool via the Chemspy Toolbox or download the Chemrefer toolbar.

Dell Inspiration

dell-inspironA couple of weeks ago my Dell laptop started stopping, as it were. At first, I thought it was an issue with the CPU overheating, which I thought I’d addressed with a BIOS update, but a CPU temperature monitoring program showed things were apparently fine in that department. After it happened three or four times, I realised that it was happening when I moved in my chair, or when I leant on the wrist-rest part of the base, or adjusted the screen angle, or inserted a PCMCIA card, or opened the DVD drawer…eventually it wouldn’t even POST, let alone BOOT, so basically I was stuck with a dead Dell.

I suspected a loose connection or perhaps just a chunk of conductive desktop detritus stuck somewhere in the laptop’s guts. Whatever it was I really didn’t have the tools to fix it myself and thought, why should I? The machine is only a couple of years old, and although it’s outside the standard warranty period, I’d have expected at least twice as long as being a reasonable lifetime. So, I got in touch with the manufacturer – Dell – via their press office – and suggested as much.

With the fastest turnaround of any tech support department I’ve ever dealt with, my machine was picked up by DHL on Tuesday last thing, posted to Dell, and booted back to me today (Friday) in plenty of time for the World Cup! Apparently, faulty components included ASSY, PWA, PLN, 5150, DOOR, MINI-PCI, NBK, ABCS, ASSY, HTSNK, W/FAN, THRMGRS, 5150, KYBD, ENG, UK, 86, S-PTG, ABCS…etc etc I recognise the word DOOR in their and KYBD must mean keyboard, and some of the other things seem to relate to different bits of plastic and fans and cuh, but I haven’t really the time nor the inclination to look up any of the others, so we’ll just leave it at that.

Anyway, from a quick test, it seems to be working fine. So, I’d like to extend a thank you to John L at Dell in Ireland who handled my complaint so graciously and expeditiously.

Until the fault appeared, the machine had always been fast and reliable, and when a problem arose, the company dealt with it efficiently and professionally. Now, I can get back up to speed…

Spyware White Paper

The full impact of spyware has not yet been seen, individuals may suffer person computer slow down and loss of personal information to some corporate database, but in business spyware can be a far more insidious threat. Keeping your organization spyware free is essential and according to Surfcontrol’s White Paper on the subject (available for free download from Sciencebase) requires a comprehensive, multi-layered approach.

Organizations are waking up to the spyware epidemic, but many are still addressing it with point-solutions and treating it as an isolated problem. In reality, it can cost billions in compromised security, network resources, productivity, and even legal liability. This white paper explores the full impact of spyware in the enterprise, and outlines an aggressive, multi-layered approach to not only remove it from the workplace, but deny its admittance entirely.

Uncrackable windows and unbreakable glass

In the same Digg discussion I read of a novel glass replacement called Kwarx that is meant to be unbreakable and so could save all that sweeping up after your next drunken cocktail party and a purported announcement from Bill Gates that the next version of the Windows operating system, Vista, will be unhackable! Is this just a coincidence or is Gates hoping to exploit the sparkling character and shatter-proof nature of Kwarx to keep his Windows nice and clean?